BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C04LP1|AL429706
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1353 1800 0.0
>3x_Contig1353
Length = 8234
Score = 1800 bits (908), Expect = 0.0
Identities = 920/924 (99%)
Strand = Plus / Minus
Query: 1 gccgatttaccaacaccaccgccaccaacgacgactagtttatattctctgatattgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5177 gccgatttaccaacaccaccgccaccaacgacgactagtttatattctctgatattgctc 5118
Query: 61 taaggtgtcacagcagggctgcgagagagaaaataatgttcaaataatacatgcagacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 taaggtgtcacagcagggctgcgagagagaaaataatgttcaaataatacatgcagacag 5058
Query: 121 tgctgaaagacaatgatgaattaacgacctaaaattaaagggaaaccccctgaagaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 tgctgaaagacaatgatgaattaacgacctaaaattaaagggaaaccccctgaagaggaa 4998
Query: 181 gcaaattcacaccttatcatcatatttcaacaaagtcatcggcattgcatcacgtatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 gcaaattcacaccttatcatcatatttcaacaaagtcatcggcattgcatcacgtatact 4938
Query: 241 cgaacattattttaattgaactgttagtatacttttgtcaaatctcaaagacccaatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4937 cgaacattattttaattgaactgttagtatacttttgtcaaatctcaaagacccaatgtt 4878
Query: 301 accacgaaggaacatgtacaaagaagagacaaactgaggagatcagaagccatattccag 360
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 accacgaagtgaaatgtacaaagaagagacaaactgaggagatcagaagccatattccag 4818
Query: 361 cacacacacaataacatactttatttaacgacatttcgcagtgtacaaatgtaaatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 cacacacacaataacatactttatttaacgacatttcgcagtgtacaaatgtaaatccct 4758
Query: 421 cactattttaatctacaacgaggtccctcttttccctatgatatgagccatgattgtgca 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4757 cactattttaatctacaacgaggtccctcttttccctatgatatgagcaatgattgtgca 4698
Query: 481 taggtgttgtcaacgtacataagtagaatttaacaaagcttattattataaggtacaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 taggtgttgtcaacgtacataagtagaatttaacaaagcttattattataaggtacaaca 4638
Query: 541 aaaattttttttatttttctaaatttttatttcaaattcggtaagtatgcgaaaagagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 aaaattttttttatttttctaaatttttatttcaaattcggtaagtatgcgaaaagagac 4578
Query: 601 agattacatgaattgaaggaaccctttttttctcatcaatacgatgctgctgcttgctta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 agattacatgaattgaaggaaccctttttttctcatcaatacgatgctgctgcttgctta 4518
Query: 661 ttattatttctttcgacaagaaatggaaatggaaatagaatttcccaaaaaaatgatgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4517 ttattatttctttcgacaagaaatggaaatggaaatagaatttcccaaaaaaatgatgct 4458
Query: 721 tgaccagatcaattatattctcagtagttgctgagatcgaggttgaatatctcaagggtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 tgaccagatcaattatattctcagtagttgctgagatcgaggttgaatatctcaagggtt 4398
Query: 781 tttttccttttgcatttatgcatcatgaactgagtgacgagacagtgatatatattatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 tttttccttttgcatttatgcatcatgaactgagtgacgagacagtgatatatattatat 4338
Query: 841 ttatttccggtggtaaatattatgttggtgcagctagctaattctttttcaaacagtcat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 ttatttccggtggtaaatattatgttggtgcagctagctaattctttttcaaacagtcat 4278
Query: 901 cgcagtaccatttccctttaggta 924
||||||||||||||||||||||||
Sbjct: 4277 cgcagtaccatttccctttaggta 4254
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,237
Number of Sequences: 1807
Number of extensions: 10237
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)